LiCSAR Wiki (from gitlab)

New User

  1. Register yourself at CEMS/JASMIN and its relevant services: jasmin_setup

  2. Learn the first steps about CEMS/JASMIN services (including ssh settings etc.): cems_quick_start

  3. Set yourself to licsar modules and learn to use licsar_framebatch: licsar_settings

  4. Setting for LiCSAR environment on Leeds Uni servers: leeds_uni_setup

Getting users into details

  1. Tutorial related to NLA: nla

  2. CEDA JASMIN (previously CEMS) processing strategy (processing queues etc.): lotus queues

  3. Other detail notes: other - including instructions for data copying from CEMS etc.

Use the LiCSAR codes

  1. Tutorial to use licsar_framebatch procedure:

    automatic licsar_framebatch - main functionality, allowing fast and easy processing of selected frame

    manual/detailed licsar_framebatch

  2. customizing the processing - e.g. custom snaphu parameters etc.

  3. Setting up LiCSAR environment at Leeds Uni servers (not JASMIN)

Processing at JASMIN

LiCSAR at JASMIN notebooks

Although we use primarily JASMIN as in materials above (i.e. ssh in terminal), one can also access JASMIN Jupyter Notebook service . And if you run a simple script in sci server terminal: install_mamba_jupy.sh, you will then be able to connect to mambalics environment that includes LiCSAR testing codes. Consider this message a LiCSAR Easter Egg..

Note: while you will have access to /gws folders for reading, you will NOT have access to /scratch disks and you will have write rights only to your home directory.